U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

IGSF5 immunoglobulin superfamily member 5 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100400980, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
IGSF5
Gene description
immunoglobulin superfamily member 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See IGSF5 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 21 NC_071462.1 (43869856..43909868)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 21 NC_048403.1 (44505543..44545533)

Chromosome 21 - NC_071462.1Genomic Context describing neighboring genes Neighboring gene putative uncharacterized protein B3GALT5-AS1 Neighboring gene small nucleolar RNA SNORA48 Neighboring gene beta-1,3-galactosyltransferase 5 Neighboring gene Purkinje cell protein 4 Neighboring gene DS cell adhesion molecule Neighboring gene heterogeneous nuclear ribonucleoprotein D-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
immunoglobulin superfamily member 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071462.1 Reference mCalJa1.2.pat.X

    Range
    43869856..43909868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035282964.2 → XP_035138855.1  immunoglobulin superfamily member 5

    UniProtKB/TrEMBL
    A0A8I3W150
    Conserved Domains (3) summary
    smart00409
    Location:49 → 144
    IG; Immunoglobulin
    cd00096
    Location:154 → 157
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:154 → 234
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.