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CCDC25 coiled-coil domain containing 25 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100399001, updated on 8-Mar-2024

Summary

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Gene symbol
CCDC25
Gene description
coiled-coil domain containing 25
See related
Ensembl:ENSCJAG00000015395
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 13 NC_071454.1 (10828039..10864720)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 13 NC_048395.1 (10910815..10947543)

Chromosome 13 - NC_071454.1Genomic Context describing neighboring genes Neighboring gene PDZ binding kinase Neighboring gene establishment of sister chromatid cohesion N-acetyltransferase 2 Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC118146740 Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC118146739

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 25

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071454.1 Reference mCalJa1.2.pat.X

    Range
    10828039..10864720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002756809.7 → XP_002756855.3  coiled-coil domain-containing protein 25 isoform X1

    UniProtKB/TrEMBL
    F6ZN09
    Conserved Domains (1) summary
    pfam05670
    Location:1 → 112
    DUF814; Domain of unknown function (DUF814)

  2. XM_035269917.2 → XP_035125808.1  coiled-coil domain-containing protein 25 isoform X2

    Conserved Domains (1) summary
    pfam05670
    Location:1 → 96
    DUF814; Domain of unknown function (DUF814)

  3. XM_035269916.2 → XP_035125807.1  coiled-coil domain-containing protein 25 isoform X3

    Conserved Domains (1) summary
    pfam05670
    Location:16 → 102
    DUF814; Domain of unknown function (DUF814)

  4. XM_017963668.4 → XP_017819157.1  coiled-coil domain-containing protein 25 isoform X4

    UniProtKB/TrEMBL
    F6WC88
    Related
    ENSCJAP00000042322.1
    Conserved Domains (1) summary
    cl05307
    Location:1 → 44
    DUF814; Domain of unknown function (DUF814)
Nucleotide Protein
Heading Accession and Version

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