U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CCDC106 coiled-coil domain containing 106 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100398571, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CCDC106
Gene description
coiled-coil domain containing 106
See related
Ensembl:ENSCJAG00000017098
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CCDC106 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 22 NC_071463.1 (47132108..47138666)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 22 NC_048404.1 (48528978..48534773)

Chromosome 22 - NC_071463.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108589469 Neighboring gene zinc finger protein 580 Neighboring gene zinc finger protein 581 Neighboring gene uncharacterized LOC118150273 Neighboring gene U2 small nuclear RNA auxiliary factor 2 Neighboring gene epsin 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
coiled-coil domain-containing protein 106

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071463.1 Reference mCalJa1.2.pat.X

    Range
    47132108..47138666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054249601.1 → XP_054105576.1  coiled-coil domain-containing protein 106 isoform X1

  2. XM_008988686.4 → XP_008986934.1  coiled-coil domain-containing protein 106 isoform X2

    See identical proteins and their annotated locations for XP_008986934.1

    UniProtKB/TrEMBL
    A0A2R8M3Y0, A0A2R8MTH7, F7IHD1
    Related
    ENSCJAP00000031424.2
    Conserved Domains (1) summary
    pfam15794
    Location:56 → 275
    CCDC106; Coiled-coil domain-containing protein 106

  3. XM_008988685.4 → XP_008986933.1  coiled-coil domain-containing protein 106 isoform X2

    See identical proteins and their annotated locations for XP_008986933.1

    UniProtKB/TrEMBL
    A0A2R8M3Y0, A0A2R8MTH7, F7IHD1
    Conserved Domains (1) summary
    pfam15794
    Location:56 → 275
    CCDC106; Coiled-coil domain-containing protein 106

  4. XM_054249602.1 → XP_054105577.1  coiled-coil domain-containing protein 106 isoform X1

  5. XM_054249604.1 → XP_054105579.1  coiled-coil domain-containing protein 106 isoform X1

  6. XM_054249598.1 → XP_054105573.1  coiled-coil domain-containing protein 106 isoform X1

  7. XM_054249603.1 → XP_054105578.1  coiled-coil domain-containing protein 106 isoform X1

  8. XM_054249597.1 → XP_054105572.1  coiled-coil domain-containing protein 106 isoform X1

  9. XM_054249596.1 → XP_054105571.1  coiled-coil domain-containing protein 106 isoform X1

  10. XM_008988684.4 → XP_008986932.1  coiled-coil domain-containing protein 106 isoform X2

    See identical proteins and their annotated locations for XP_008986932.1

    UniProtKB/TrEMBL
    A0A2R8M3Y0, A0A2R8MTH7, F7IHD1
    Conserved Domains (1) summary
    pfam15794
    Location:56 → 275
    CCDC106; Coiled-coil domain-containing protein 106

  11. XM_054249599.1 → XP_054105574.1  coiled-coil domain-containing protein 106 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.