U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CDC42EP3 CDC42 effector protein 3 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100396344, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CDC42EP3
Gene description
CDC42 effector protein 3
See related
Ensembl:ENSCJAG00000003993
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 14
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 14 NC_071455.1 (75156952..75184907)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 14 NC_048396.1 (74095639..74125706)

Chromosome 14 - NC_071455.1Genomic Context describing neighboring genes Neighboring gene regulator of microtubule dynamics 2 Neighboring gene serine-threonine kinase receptor-associated protein-like Neighboring gene uncharacterized LOC128929644 Neighboring gene uncharacterized LOC118147138

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

General protein information

Go to the top of the page Help
Preferred Names
cdc42 effector protein 3
Names
CDC42 effector protein (Rho GTPase binding) 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071455.1 Reference mCalJa1.2.pat.X

    Range
    75156952..75184907
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035272788.2 → XP_035128679.1  cdc42 effector protein 3

    UniProtKB/TrEMBL
    U3BCL6
    Conserved Domains (2) summary
    pfam14957
    Location:102 → 253
    BORG_CEP; Cdc42 effector
    cl00113
    Location:30 → 86
    CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...

  2. XM_008980852.4 → XP_008979100.1  cdc42 effector protein 3

    See identical proteins and their annotated locations for XP_008979100.1

    UniProtKB/TrEMBL
    U3BCL6
    Conserved Domains (2) summary
    pfam14957
    Location:102 → 253
    BORG_CEP; Cdc42 effector
    cl00113
    Location:30 → 86
    CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...

  3. XM_054245042.1 → XP_054101017.1  cdc42 effector protein 3

    UniProtKB/TrEMBL
    U3BCL6

  4. XM_008980851.4 → XP_008979099.1  cdc42 effector protein 3

    See identical proteins and their annotated locations for XP_008979099.1

    UniProtKB/TrEMBL
    U3BCL6
    Related
    ENSCJAP00000049705.1
    Conserved Domains (2) summary
    pfam14957
    Location:102 → 253
    BORG_CEP; Cdc42 effector
    cl00113
    Location:30 → 86
    CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.