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FLCN folliculin [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100395467, updated on 3-Apr-2024

Summary

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Gene symbol
FLCN
Gene description
folliculin
See related
Ensembl:ENSCJAG00000007820
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (58339989..58372375, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (61052251..61084643, complement)

Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128932068 Neighboring gene phospholipase D family member 6 Neighboring gene COP9 signalosome subunit 3 Neighboring gene tubulin beta-8 chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
folliculin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071446.1 Reference mCalJa1.2.pat.X

    Range
    58339989..58372375 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017968940.3 → XP_017824429.2  folliculin isoform X2

  2. XM_008990347.4 → XP_008988595.2  folliculin isoform X1

    UniProtKB/TrEMBL
    H9KWG7

  3. XM_035299207.2 → XP_035155098.2  folliculin isoform X1

    UniProtKB/TrEMBL
    H9KWG7

  4. XM_008990343.4 → XP_008988591.2  folliculin isoform X1

    UniProtKB/TrEMBL
    H9KWG7

  5. XM_002763577.5 → XP_002763623.2  folliculin isoform X1

    UniProtKB/TrEMBL
    H9KWG7

  6. XM_035299208.2 → XP_035155099.2  folliculin isoform X1

    UniProtKB/TrEMBL
    H9KWG7

  7. XM_008990345.4 → XP_008988593.2  folliculin isoform X1

    UniProtKB/TrEMBL
    H9KWG7

  8. XM_008990344.4 → XP_008988592.2  folliculin isoform X1

    UniProtKB/TrEMBL
    H9KWG7

  9. XM_035299204.2 → XP_035155095.2  folliculin isoform X3

  10. XM_035299205.2 → XP_035155096.2  folliculin isoform X1

    UniProtKB/TrEMBL
    H9KWG7

  11. XM_008990342.4 → XP_008988590.2  folliculin isoform X1

    UniProtKB/TrEMBL
    H9KWG7

  12. XM_035299206.2 → XP_035155097.2  folliculin isoform X1

    UniProtKB/TrEMBL
    H9KWG7

RNA

  1. XR_004743049.2 RNA Sequence

  2. XR_004743048.2 RNA Sequence

  3. XR_004743047.2 RNA Sequence

Nucleotide Protein
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