U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NOLC1 nucleolar and coiled-body phosphoprotein 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100395007, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
NOLC1
Gene description
nucleolar and coiled-body phosphoprotein 1
See related
Ensembl:ENSCJAG00000017832
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 12 NC_071453.1 (91764025..91776408)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 12 NC_048394.1 (92480143..92492897)

Chromosome 12 - NC_071453.1Genomic Context describing neighboring genes Neighboring gene LIM domain binding 1 Neighboring gene uncharacterized LOC118146377 Neighboring gene PPARG related coactivator 1 Neighboring gene uncharacterized LOC108594191 Neighboring gene L-lactate dehydrogenase A chain-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
nucleolar and coiled-body phosphoprotein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071453.1 Reference mCalJa1.2.pat.X

    Range
    91764025..91776408
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002756550.5 → XP_002756596.2  nucleolar and coiled-body phosphoprotein 1 isoform X4

    See identical proteins and their annotated locations for XP_002756596.2

    UniProtKB/TrEMBL
    U3CEU9
    Related
    ENSCJAP00000042464.1
    Conserved Domains (1) summary
    pfam05022
    Location:624 → 690
    SRP40_C; SRP40, C-terminal domain

  2. XM_035268888.2 → XP_035124779.1  nucleolar and coiled-body phosphoprotein 1 isoform X1

    Conserved Domains (1) summary
    pfam05022
    Location:635 → 707
    SRP40_C; SRP40, C-terminal domain

  3. XM_035268890.2 → XP_035124781.1  nucleolar and coiled-body phosphoprotein 1 isoform X5

    Conserved Domains (1) summary
    pfam05022
    Location:598 → 670
    SRP40_C; SRP40, C-terminal domain

  4. XM_035268891.2 → XP_035124782.1  nucleolar and coiled-body phosphoprotein 1 isoform X6

    Conserved Domains (1) summary
    pfam05022
    Location:588 → 660
    SRP40_C; SRP40, C-terminal domain

  5. XM_054243277.1 → XP_054099252.1  nucleolar and coiled-body phosphoprotein 1 isoform X8

  6. XM_035268889.2 → XP_035124780.1  nucleolar and coiled-body phosphoprotein 1 isoform X2

    UniProtKB/TrEMBL
    F7GVM6
    Conserved Domains (1) summary
    pfam05022
    Location:634 → 706
    SRP40_C; SRP40, C-terminal domain

  7. XM_035268892.2 → XP_035124783.1  nucleolar and coiled-body phosphoprotein 1 isoform X7

    Conserved Domains (1) summary
    pfam05022
    Location:587 → 659
    SRP40_C; SRP40, C-terminal domain

  8. XM_009010193.3 → XP_009008441.1  nucleolar and coiled-body phosphoprotein 1 isoform X3

    See identical proteins and their annotated locations for XP_009008441.1

    UniProtKB/TrEMBL
    U3D2F3
    Conserved Domains (1) summary
    pfam05022
    Location:625 → 691
    SRP40_C; SRP40, C-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.