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AP3B2 adaptor related protein complex 3 subunit beta 2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100394963, updated on 8-Mar-2024

Summary

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Gene symbol
AP3B2
Gene description
adaptor related protein complex 3 subunit beta 2
See related
Ensembl:ENSCJAG00000015979
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 6 NC_071447.1 (22264319..22304145, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 6 NC_048388.1 (22244456..22284283, complement)

Chromosome 6 - NC_071447.1Genomic Context describing neighboring genes Neighboring gene cytoplasmic polyadenylation element binding protein 1 Neighboring gene U1 spliceosomal RNA Neighboring gene nucleophosmin-like Neighboring gene small Cajal body-specific RNA 15 Neighboring gene polycomb group RING finger protein 5-like Neighboring gene fibronectin type III and SPRY domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in anterograde synaptic vesicle transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-3 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-3 complex subunit beta-2
Names
adaptor related protein complex 3 beta 2 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071447.1 Reference mCalJa1.2.pat.X

    Range
    22264319..22304145 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002749173.4 → XP_002749219.1  AP-3 complex subunit beta-2 isoform X2

    See identical proteins and their annotated locations for XP_002749219.1

    UniProtKB/TrEMBL
    A0A5F4VUZ5, U3C4P7
    Related
    ENSCJAP00000029514.2
    Conserved Domains (3) summary
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:34 → 590
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:806 → 949
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  2. XM_017973317.2 → XP_017828806.1  AP-3 complex subunit beta-2 isoform X1

    UniProtKB/TrEMBL
    F7GTK5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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