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AGTRAP angiotensin II receptor associated protein [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100389553, updated on 8-Mar-2024

Summary

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Gene symbol
AGTRAP
Gene description
angiotensin II receptor associated protein
See related
Ensembl:ENSCJAG00000013319
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 7 NC_071448.1 (46712734..46730574)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 7 NC_048389.1 (48222776..48245031)

Chromosome 7 - NC_071448.1Genomic Context describing neighboring genes Neighboring gene F-box protein 6 Neighboring gene mitotic arrest deficient 2 like 2 Neighboring gene dorsal inhibitory axon guidance protein Neighboring gene splicing factor 3B subunit 4-like Neighboring gene chromosome 7 C1orf167 homolog Neighboring gene methylenetetrahydrofolate reductase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in angiotensin-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of blood pressure IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type-1 angiotensin II receptor-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071448.1 Reference mCalJa1.2.pat.X

    Range
    46712734..46730574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002750303.5 → XP_002750349.1  type-1 angiotensin II receptor-associated protein isoform X3

    See identical proteins and their annotated locations for XP_002750349.1

    UniProtKB/TrEMBL
    U3CLC5
    Related
    ENSCJAP00000024470.1
    Conserved Domains (1) summary
    pfam06396
    Location:9 → 152
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)

  2. XM_009000410.3 → XP_008998658.1  type-1 angiotensin II receptor-associated protein isoform X4

    See identical proteins and their annotated locations for XP_008998658.1

    UniProtKB/TrEMBL
    U3FGS3
    Conserved Domains (1) summary
    pfam06396
    Location:9 → 145
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)

  3. XM_009000409.4 → XP_008998657.1  type-1 angiotensin II receptor-associated protein isoform X2

    Conserved Domains (1) summary
    pfam06396
    Location:18 → 154
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)

  4. XM_009000408.4 → XP_008998656.1  type-1 angiotensin II receptor-associated protein isoform X1

    Conserved Domains (1) summary
    pfam06396
    Location:18 → 161
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)
Nucleotide Protein
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