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MMP14 matrix metallopeptidase 14 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100389088, updated on 8-Mar-2024

Summary

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Gene symbol
MMP14
Gene description
matrix metallopeptidase 14
See related
Ensembl:ENSCJAG00000008538
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 10 NC_071451.1 (53027184..53039107)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 10 NC_048392.1 (53682993..53694915)

Chromosome 10 - NC_071451.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 7 member 7 Neighboring gene uncharacterized LOC108593440 Neighboring gene mitochondrial ribosomal protein L52 Neighboring gene LDL receptor related protein 10 Neighboring gene RRAD and GEM like GTPase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in zymogen activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
matrix metalloproteinase-14
Names
matrix metalloproteinase-14 preproprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071451.1 Reference mCalJa1.2.pat.X

    Range
    53027184..53039107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002753610.6 → XP_002753656.1  matrix metalloproteinase-14

    See identical proteins and their annotated locations for XP_002753656.1

    UniProtKB/TrEMBL
    F7DBK0, F7DC60
    Related
    ENSCJAP00000042261.1
    Conserved Domains (4) summary
    cd00094
    Location:316 → 508
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    pfam00413
    Location:118 → 284
    Peptidase_M10; Matrixin
    pfam01471
    Location:36 → 88
    PG_binding_1; Putative peptidoglycan binding domain
    pfam11857
    Location:559 → 582
    DUF3377; Domain of unknown function (DUF3377)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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