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    DDX55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100387154, updated on 17-Feb-2013
    Gene symbol
    DDX55
    Gene description
    DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
    See related
    Ensembl:ENSCJAG00000020471
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix
    Location :
    chromosome: 9
    Sequence :
    Chromosome: 9; NC_013904.1 (114507211..114522701)
    See DDX55 in MapViewer

    Chromosome 9 - NC_013904.1Genomic Context describing neighboring genes Neighboring gene AP-2 complex subunit mu-like Neighboring gene transmembrane emp24 domain-containing protein 2-like Neighboring gene eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa Neighboring gene general transcription factor IIH, polypeptide 3, 34kDa

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction

    Markers

    Homology

    Names
    DEAD (Asp-Glu-Ala-Asp) box polypeptide 55

    RefSeqs of Annotated Genomes: Build 1.2

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Callithrix jacchus-3.2

    Genomic

    1. NC_013904.1

      Range
      114507211..114522701
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002807156.2 → XP_002807202.2  

      UniProtKB/TrEMBL
      F7FCJ5
      Related
      ENSCJAP00000038061, ENSCJAT00000040208
      Conserved Domains (4) summary
      cd00268
      Location:9 – 224
      Blast Score: 516
      DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
      cd00079
      Location:242 – 371
      Blast Score: 270
      HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
      smart00487
      Location:24 – 228
      Blast Score: 349
      DEXDc; DEAD-like helicases superfamily
      pfam13959
      Location:402 – 465
      Blast Score: 244
      DUF4217; Domain of unknown function (DUF4217)
    Nucleotide Protein
    Heading Accession and Version
    genomic ACFV01155311.1 (11774..27264) None

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Map Viewer
        These links are maintained by the Map Viewer group and are provided when a GeneID is annotated on a map for the same species.
      • Nucleotide
        Link to related Nucleotide entry
      • Probe
        Related Probe entry
      • Protein
        Link to related protein entry
      • PubChem Compound
        PubChem Compounds
      • PubChem Substance
        PubChem Substances
      • RefSeq Proteins
        Link to Protein RefSeqs
      • RefSeq RNAs
        Link to Nucleotide RefSeq RNAs
      • Taxonomy
        Link to related taxonomy entry
      • UniSTS
        Related UniSTS records

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