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CCNYL1 cyclin Y like 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100386655, updated on 8-Mar-2024

Summary

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Gene symbol
CCNYL1
Gene description
cyclin Y like 1
See related
Ensembl:ENSCJAG00000002901
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 6 NC_071447.1 (125666010..125711927)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 6 NC_048388.1 (126861814..126907768)

Chromosome 6 - NC_071447.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118154651 Neighboring gene U6 spliceosomal RNA Neighboring gene keratin, type II cytoskeletal 8-like Neighboring gene uncharacterized LOC100897063 Neighboring gene frizzled class receptor 5 Neighboring gene pleckstrin homology domain containing M3 Neighboring gene dnaJ homolog subfamily A member 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-Y-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071447.1 Reference mCalJa1.2.pat.X

    Range
    125666010..125711927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002749708.5 → XP_002749754.3  cyclin-Y-like protein 1 isoform X1

    UniProtKB/TrEMBL
    F7HYI9
    Related
    ENSCJAP00000005259.2
    Conserved Domains (1) summary
    pfam00134
    Location:163 → 285
    Cyclin_N; Cyclin, N-terminal domain

  2. XM_035305486.2 → XP_035161377.1  cyclin-Y-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A2R8M7R8
    Conserved Domains (1) summary
    cd20540
    Location:135 → 231
    CYCLIN_CCNY_like; cyclin box found in cyclin-Y (CCNY) family

  3. XM_035305485.2 → XP_035161376.1  cyclin-Y-like protein 1 isoform X2

    Conserved Domains (1) summary
    cd20540
    Location:51 → 147
    CYCLIN_CCNY_like; cyclin box found in cyclin-Y (CCNY) family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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