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PGF placental growth factor [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100386568, updated on 8-Mar-2024

Summary

Gene symbol
PGF
Gene description
placental growth factor
See related
Ensembl:ENSCJAG00000020572
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
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Genomic context

See PGF in Genome Data Viewer
Location:
chromosome: 10
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 10 NC_071451.1 (105749260..105763344, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 10 NC_048392.1 (106393234..106407343, complement)

Chromosome 10 - NC_071451.1Genomic Context describing neighboring genes Neighboring gene dihydrolipoamide S-succinyltransferase Neighboring gene ribosomal protein S6 kinase like 1 Neighboring gene uncharacterized LOC118144988 Neighboring gene eukaryotic translation initiation factor 2B subunit beta

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemoattractant activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables vascular endothelial growth factor receptor binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071451.1 Reference mCalJa1.2.pat.X

    Range
    105749260..105763344 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002754115.4XP_002754161.1  placenta growth factor isoform X2

    See identical proteins and their annotated locations for XP_002754161.1

    UniProtKB/TrEMBL
    U3BDP8
    Conserved Domains (1) summary
    smart00141
    Location:50132
    PDGF; Platelet-derived and vascular endothelial growth factors (PDGF, VEGF) family
  2. XM_002754114.3XP_002754160.1  placenta growth factor isoform X1

    See identical proteins and their annotated locations for XP_002754160.1

    UniProtKB/TrEMBL
    F7ITA1, U3D1B7
    Related
    ENSCJAP00000038232.2
    Conserved Domains (1) summary
    smart00141
    Location:50132
    PDGF; Platelet-derived and vascular endothelial growth factors (PDGF, VEGF) family