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MYO5C myosin VC [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100385252, updated on 3-Apr-2024

Summary

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Gene symbol
MYO5C
Gene description
myosin VC
See related
Ensembl:ENSCJAG00000000926
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
42
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 10 NC_071451.1 (35691442..35797828, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 10 NC_048392.1 (36373782..36480153, complement)

Chromosome 10 - NC_071451.1Genomic Context describing neighboring genes Neighboring gene BCL2 like 10 Neighboring gene G protein subunit beta 5 Neighboring gene nucleophosmin-like Neighboring gene myosin VA Neighboring gene fatty acyl-CoA reductase 1-like Neighboring gene cyclin-dependent kinase 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microfilament motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle transport along actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
unconventional myosin-Vc

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071451.1 Reference mCalJa1.2.pat.X

    Range
    35691442..35797828 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017976870.3 → XP_017832359.3  unconventional myosin-Vc isoform X2

  2. XM_009005459.4 → XP_009003707.3  unconventional myosin-Vc isoform X3

  3. XM_002753496.5 → XP_002753542.3  unconventional myosin-Vc isoform X1

    UniProtKB/TrEMBL
    A0A8I3WP08

  4. XM_035259670.2 → XP_035115561.2  unconventional myosin-Vc isoform X4

  5. XM_009005460.4 → XP_009003708.3  unconventional myosin-Vc isoform X4

  6. XM_035259671.2 → XP_035115562.2  unconventional myosin-Vc isoform X5

RNA

  1. XR_001913858.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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