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slc17a5 solute carrier family 17 member 5 [ Salmo salar (Atlantic salmon) ]

Gene ID: 100380550, updated on 8-Mar-2024

Summary

Gene symbol
slc17a5
Gene description
solute carrier family 17 member 5
See related
Ensembl:ENSSSAG00000077945
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Also known as
s17a5
Orthologs
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Genomic context

Location:
chromosome: ssa18
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa18 NC_059459.1 (16837134..16852065, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa18 NC_027317.1 (15539705..15555559, complement)

Chromosome ssa18 - NC_059459.1Genomic Context describing neighboring genes Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 Neighboring gene cyclic GMP-AMP synthase a Neighboring gene eukaryotic translation elongation factor 1 alpha 1a Neighboring gene lathosterol oxidase Neighboring gene small nucleolar RNA SNORA57 Neighboring gene Ras and Rab interactor 2a

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001173835.1NP_001167306.1  sialin

    See identical proteins and their annotated locations for NP_001167306.1

    Status: PROVISIONAL

    Source sequence(s)
    BT059615
    UniProtKB/TrEMBL
    A0A1S3N3H4, C0HBA9
    Related
    ENSSSAP00000110322.2, ENSSSAT00000145239.2
    Conserved Domains (1) summary
    cd17381
    Location:44475
    MFS_SLC17A5; Solute carrier family 17 member 5 (also called sialin) of the Major Facilitator Superfamily of transporters

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059459.1 Reference Ssal_v3.1

    Range
    16837134..16852065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)