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eola1 endothelium and lymphocyte associated ASCH domain 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100379929, updated on 4-May-2023

Summary

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Official Symbol
eola1provided by Xenbase
Official Full Name
endothelium and lymphocyte associated ASCH domain 1provided by Xenbase
Primary source
Xenbase:XB-GENE-1008603
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
cxorf40; cxorf40a
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Genomic context

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See eola1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (64677504..64679539, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (43500257..43502069, complement)

Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene sushi-repeat containing protein X-linked 2 Neighboring gene synaptotagmin like 4 Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene transfer RNA glutamic acid (anticodon CUC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein CXorf40A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    64677504..64679539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002940437.5 → XP_002940483.2  protein CXorf40A

    UniProtKB/TrEMBL
    A0A8J0QWE6
    Conserved Domains (1) summary
    cl01020
    Location:83 → 187
    ASCH; ASC-1 homology or ASCH domain, a small beta-barrel domain found in all three kingdoms of life. ASCH resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain during coactivation, ...
Nucleotide Protein Strain
Heading Accession and Version

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