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CPR72 cuticular protein RR-2 motif 72 [ Bombyx mori (domestic silkworm) ]

Gene ID: 100379401, updated on 9-Feb-2024

Summary

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Gene symbol
CPR72
Gene description
cuticular protein RR-2 motif 72
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
Also known as
BmorCPR72
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Genomic context

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Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 7 NC_085113.1 (6827831..6836309, complement)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 7 NC_051364.1 (6832727..6839571, complement)

Chromosome 7 - NC_085113.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 5B, mitochondrial Neighboring gene cuticular protein RR-2 motif 71 Neighboring gene cuticular protein RR-2 motif 73 Neighboring gene cysteine-rich hydrophobic domain-containing protein 2 Neighboring gene uncharacterized LOC134199155

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification of cuticular protein genes in the silkworm, Bombyx mori. Futahashi R, et al. Insect Biochem Mol Biol, 2008 Dec. PMID 19280704
  2. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cuticular protein RR-2 motif 72

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001173217.1 → NP_001166688.1  cuticular protein RR-2 motif 72

    See identical proteins and their annotated locations for NP_001166688.1

    Status: PROVISIONAL

    Source sequence(s)
    BR000573
    UniProtKB/TrEMBL
    C0H6R4
    Conserved Domains (1) summary
    pfam00379
    Location:29 → 81
    Chitin_bind_4; Insect cuticle protein

RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085113.1 Reference ASM3026992v2 Primary Assembly

    Range
    6827831..6836309 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021351348.3 → XP_021207023.1  cuticular protein RR-2 motif 72 isoform X1

    UniProtKB/TrEMBL
    A0A8R2HSC5
    Conserved Domains (1) summary
    pfam00379
    Location:33 → 85
    Chitin_bind_4; Insect cuticle protein
Nucleotide Protein
Heading Accession and Version

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