Format

Send to:

Choose Destination

Elp3 elongator acetyltransferase complex subunit 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100362548, updated on 17-May-2016
Official Symbol
Elp3provided by RGD
Official Full Name
elongator acetyltransferase complex subunit 3provided by RGD
Primary source
RGD:2324506
See related
Ensembl:ENSRNOG00000014291
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
Orthologs
Location:
15p12
Exon count:
15
Annotation release Status Assembly Chr Location
105 current Rnor_6.0 (GCF_000001895.5) 15 NC_005114.4 (48942866..49005075, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 15 NC_005114.3 (52682548..52744186, complement)

Chromosome 15 - NC_005114.4Genomic Context describing neighboring genes Neighboring gene zinc finger protein 395 Neighboring gene prepronociceptin Neighboring gene annexin 2 pseudogene1 Neighboring gene ribosomal protein S17-like Neighboring gene nuclear GTPase, germinal center associated

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
H3 histone acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
H3 histone acetyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
H4 histone acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
H4 histone acetyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
RNA polymerase II core binding IEA
Inferred from Electronic Annotation
more info
 
contributes_to RNA polymerase II core binding ISO
Inferred from Sequence Orthology
more info
 
histone acetyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
phosphorylase kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 
phosphorylase kinase regulator activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
central nervous system development IEA
Inferred from Electronic Annotation
more info
 
central nervous system development ISO
Inferred from Sequence Orthology
more info
 
histone H3 acetylation IEA
Inferred from Electronic Annotation
more info
 
histone H3 acetylation ISO
Inferred from Sequence Orthology
more info
 
histone H4 acetylation IEA
Inferred from Electronic Annotation
more info
 
histone H4 acetylation ISO
Inferred from Sequence Orthology
more info
 
neuron migration IEA
Inferred from Electronic Annotation
more info
 
neuron migration ISO
Inferred from Sequence Orthology
more info
 
positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 
positive regulation of cell migration ISO
Inferred from Sequence Orthology
more info
 
regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
regulation of transcription from RNA polymerase II promoter IBA
Inferred from Biological aspect of Ancestor
more info
 
regulation of transcription from RNA polymerase II promoter ISO
Inferred from Sequence Orthology
more info
 
tRNA wobble uridine modification IBA
Inferred from Biological aspect of Ancestor
more info
 
transcription elongation from RNA polymerase II promoter IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
Elongator holoenzyme complex IBA
Inferred from Biological aspect of Ancestor
more info
 
Elongator holoenzyme complex ISO
Inferred from Sequence Orthology
more info
 
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
histone acetyltransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
 
histone acetyltransferase complex ISO
Inferred from Sequence Orthology
more info
 
nucleolus IEA
Inferred from Electronic Annotation
more info
 
nucleolus ISO
Inferred from Sequence Orthology
more info
 
transcription elongation factor complex IBA
Inferred from Biological aspect of Ancestor
more info
 
transcription elongation factor complex ISO
Inferred from Sequence Orthology
more info
 
Names
elongator acetyltransferase complex subunit 3
elongation protein 3 homolog
rCG52086-like

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005114.4 Reference Rnor_6.0 Primary Assembly

    Range
    48942866..49005075 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003751505.3XP_003751553.1  

    See identical proteins and their annotated locations for XP_003751553.1

    Conserved Domains (2) summary
    cd01335
    Location:115359
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
    TIGR01211
    Location:56565
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family
  2. XM_002728290.4XP_002728336.1  

    See identical proteins and their annotated locations for XP_002728336.1

    UniProtKB/TrEMBL
    D4ACM1
    Related
    ENSRNOP00000019262, ENSRNOT00000019262
    Conserved Domains (2) summary
    cd01335
    Location:96340
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
    TIGR01211
    Location:37546
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family

Alternate Rn_Celera

Genomic

  1. AC_000083.1 Alternate Rn_Celera

    Range
    39428188..39489988 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003752820.3XP_003752868.1  

    See identical proteins and their annotated locations for XP_003752868.1

    Conserved Domains (2) summary
    cd01335
    Location:115359
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
    TIGR01211
    Location:56565
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family
  2. XM_003752819.3XP_003752867.1  

    See identical proteins and their annotated locations for XP_003752867.1

    UniProtKB/TrEMBL
    D4ACM1
    Conserved Domains (2) summary
    cd01335
    Location:96340
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
    TIGR01211
    Location:37546
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family