Car10 carbonic anhydrase 10 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Car10provided by RGD
Official Full Name: carbonic anhydrase 10provided by RGD
Primary source: RGD:2322930
See related: Ensembl:ENSRNOG00000002626 AllianceGenome:RGD:2322930
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Ca10
Summary: Predicted to enable hydro-lyase activity. Predicted to be involved in one-carbon metabolic process. Orthologous to human CA10 (carbonic anhydrase 10). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Restricted expression toward (RPKM 97.8) See more
Orthologs: human mouse all
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Genomic context

Location:: 10q26

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	10	NC_086028.1 (78551067..79053421)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	10	NC_051345.1 (78055875..78556490)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	10	NC_005109.4 (80790151..81297621)

Chromosome 10 - NC_086028.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

BF403890 (e-PCR)
- UniSTS:246530

18.MMHAP86FRF9.seq (e-PCR)
- UniSTS:123405

D10Rat219 (e-PCR), detects polymorphism
- UniSTS:226328

D3Got12 (e-PCR)
- UniSTS:113178

D10RAT150 (e-PCR)
- UniSTS:120663

D10Chm116 (e-PCR)
- UniSTS:518247

D10Mco66 (e-PCR)
- UniSTS:240245

D10Got106 (e-PCR)
- UniSTS:115835

D10Chm142 (e-PCR)
- UniSTS:518057

D10Rat93 (e-PCR)
- UniSTS:118218

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables carbonate dehydratase activity	IEA Inferred from Electronic Annotation more info
enables hydro-lyase activity	IBA Inferred from Biological aspect of Ancestor more info
enables zinc ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in one-carbon metabolic process	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: carbonic anhydrase 10

Names: carbonic anhydrase-related protein 10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.