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BPTF bromodomain PHD finger transcription factor [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100358904, updated on 8-Mar-2024

Summary

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Gene symbol
BPTF
Gene description
bromodomain PHD finger transcription factor
See related
Ensembl:ENSOCUG00000015866
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See BPTF in Genome Data Viewer
Location:
chromosome: 19
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 19 NC_067392.1 (47138638..47271030, complement)

Chromosome 19 - NC_067392.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108178564 Neighboring gene transfer RNA arginine (anticodon CCG) Neighboring gene chromosome 19 C17orf58 homolog Neighboring gene uncharacterized LOC100359163 Neighboring gene nucleolar protein 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067392.1 Chromosome 19 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methylated histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NURF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit BPTF

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067392.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    47138638..47271030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008271728.3 → XP_008269950.3  LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit BPTF

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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