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CDC40 cell division cycle 40 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100354442, updated on 3-Apr-2024

Summary

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Gene symbol
CDC40
Gene description
cell division cycle 40
See related
Ensembl:ENSOCUG00000001223
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 12 NC_067385.1 (57784538..57836990, complement)

Chromosome 12 - NC_067385.1Genomic Context describing neighboring genes Neighboring gene D-aspartate oxidase Neighboring gene mineralocorticoid receptor-like Neighboring gene methyltransferase like 24 Neighboring gene transcription factor Spi-C-like Neighboring gene WASP family member 1 Neighboring gene G protein-coupled receptor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067385.1 Chromosome 12 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-processing factor 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067385.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    57784538..57836990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051854422.1 → XP_051710382.1  pre-mRNA-processing factor 17 isoform X1

  2. XM_002714912.4 → XP_002714958.1  pre-mRNA-processing factor 17 isoform X2

    See identical proteins and their annotated locations for XP_002714958.1

    UniProtKB/TrEMBL
    A0A5F9CUM7, G1SF02
    Related
    ENSOCUP00000001059.2
    Conserved Domains (3) summary
    COG2319
    Location:198 → 579
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:281 → 579
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:292 → 330
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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