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USP47 ubiquitin specific peptidase 47 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100353650, updated on 8-Mar-2024

Summary

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Gene symbol
USP47
Gene description
ubiquitin specific peptidase 47
See related
Ensembl:ENSOCUG00000004832
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 1 NC_067374.1 (167423329..167537785)

Chromosome 1 - NC_067374.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127484386 Neighboring gene uncharacterized LOC127484385 Neighboring gene dickkopf WNT signaling pathway inhibitor 3 Neighboring gene uncharacterized LOC108177485

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067374.1 Chromosome 1 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 47

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067374.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    167423329..167537785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008266235.3 → XP_008264457.2  ubiquitin carboxyl-terminal hydrolase 47 isoform X2

  2. XM_051824800.1 → XP_051680760.1  ubiquitin carboxyl-terminal hydrolase 47 isoform X4

  3. XM_008266247.3 → XP_008264469.2  ubiquitin carboxyl-terminal hydrolase 47 isoform X5

  4. XM_017345406.2 → XP_017200895.2  ubiquitin carboxyl-terminal hydrolase 47 isoform X6

  5. XM_008266240.3 → XP_008264462.3  ubiquitin carboxyl-terminal hydrolase 47 isoform X3

  6. XM_008266233.3 → XP_008264455.3  ubiquitin carboxyl-terminal hydrolase 47 isoform X1

Nucleotide Protein
Heading Accession and Version

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