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CAMTA2 calmodulin binding transcription activator 2 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100343927, updated on 8-Mar-2024

Summary

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Gene symbol
CAMTA2
Gene description
calmodulin binding transcription activator 2
See related
Ensembl:ENSOCUG00000001109
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 19 NC_067392.1 (10097857..10114188, complement)

Chromosome 19 - NC_067392.1Genomic Context describing neighboring genes Neighboring gene enolase 3 Neighboring gene uncharacterized LOC127484446 Neighboring gene sperm associated antigen 7 Neighboring gene inhibitor of CDK, cyclin A1 interacting protein 1 Neighboring gene kinesin family member 1C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067392.1 Chromosome 19 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calmodulin-binding transcription activator 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067392.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    10097857..10114188 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008270843.3 → XP_008269065.1  calmodulin-binding transcription activator 2 isoform X10

    UniProtKB/TrEMBL
    A0A5F9CRA1, A0A5F9DCM9
    Related
    ENSOCUP00000044014.1
    Conserved Domains (5) summary
    cd00204
    Location:691 → 789
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:514 → 594
    TIG; IPT/TIG domain
    pfam13637
    Location:691 → 755
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:690 → 733
    ANK; ANK repeat [structural motif]
    cl04295
    Location:34 → 126
    CG-1; CG-1 domain

  2. XM_008270842.3 → XP_008269064.1  calmodulin-binding transcription activator 2 isoform X9

    UniProtKB/TrEMBL
    A0A5F9CRA1
    Conserved Domains (5) summary
    cd00204
    Location:691 → 789
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:514 → 594
    TIG; IPT/TIG domain
    pfam13637
    Location:691 → 755
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:690 → 733
    ANK; ANK repeat [structural motif]
    cl04295
    Location:34 → 126
    CG-1; CG-1 domain

  3. XM_008270840.3 → XP_008269062.1  calmodulin-binding transcription activator 2 isoform X7

    UniProtKB/TrEMBL
    A0A5F9CRA1, G1SES3
    Related
    ENSOCUP00000000965.3
    Conserved Domains (5) summary
    smart01076
    Location:34 → 150
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:715 → 813
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:538 → 618
    TIG; IPT/TIG domain
    pfam13637
    Location:715 → 779
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:714 → 757
    ANK; ANK repeat [structural motif]

  4. XM_002718835.4 → XP_002718881.1  calmodulin-binding transcription activator 2 isoform X6

    UniProtKB/TrEMBL
    A0A5F9CRA1
    Conserved Domains (5) summary
    smart01076
    Location:34 → 150
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:715 → 813
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:538 → 618
    TIG; IPT/TIG domain
    pfam13637
    Location:715 → 779
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:714 → 757
    ANK; ANK repeat [structural motif]

  5. XM_008270839.3 → XP_008269061.1  calmodulin-binding transcription activator 2 isoform X5

    UniProtKB/TrEMBL
    A0A5F9CPU1, A0A5F9CRA1
    Related
    ENSOCUP00000035760.1
    Conserved Domains (5) summary
    smart01076
    Location:34 → 155
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:720 → 818
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:543 → 623
    TIG; IPT/TIG domain
    pfam13637
    Location:720 → 784
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:719 → 762
    ANK; ANK repeat [structural motif]

  6. XM_008270841.3 → XP_008269063.1  calmodulin-binding transcription activator 2 isoform X8

    UniProtKB/TrEMBL
    A0A5F9CRA1
    Conserved Domains (5) summary
    cd00204
    Location:706 → 804
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:529 → 609
    TIG; IPT/TIG domain
    pfam13637
    Location:706 → 770
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:705 → 748
    ANK; ANK repeat [structural motif]
    cl04295
    Location:49 → 141
    CG-1; CG-1 domain

  7. XM_008270838.3 → XP_008269060.1  calmodulin-binding transcription activator 2 isoform X4

    UniProtKB/TrEMBL
    A0A5F9CRA1
    Conserved Domains (5) summary
    smart01076
    Location:49 → 165
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:730 → 828
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:553 → 633
    TIG; IPT/TIG domain
    pfam13637
    Location:730 → 794
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:729 → 772
    ANK; ANK repeat [structural motif]

  8. XM_008270836.3 → XP_008269058.1  calmodulin-binding transcription activator 2 isoform X2

    UniProtKB/TrEMBL
    A0A5F9CRA1
    Conserved Domains (5) summary
    smart01076
    Location:49 → 165
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:730 → 828
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:553 → 633
    TIG; IPT/TIG domain
    pfam13637
    Location:730 → 794
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:729 → 772
    ANK; ANK repeat [structural motif]

  9. XM_008270837.3 → XP_008269059.1  calmodulin-binding transcription activator 2 isoform X3

    UniProtKB/TrEMBL
    A0A5F9CRA1
    Conserved Domains (5) summary
    smart01076
    Location:49 → 170
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:735 → 833
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:558 → 638
    TIG; IPT/TIG domain
    pfam13637
    Location:735 → 799
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:734 → 777
    ANK; ANK repeat [structural motif]

  10. XM_008270835.3 → XP_008269057.1  calmodulin-binding transcription activator 2 isoform X1

    UniProtKB/TrEMBL
    A0A5F9CRA1
    Conserved Domains (5) summary
    smart01076
    Location:49 → 170
    CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
    cd00204
    Location:735 → 833
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01833
    Location:558 → 638
    TIG; IPT/TIG domain
    pfam13637
    Location:735 → 799
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:734 → 777
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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