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TRMT6 tRNA methyltransferase 6 non-catalytic subunit [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100340902, updated on 8-Mar-2024

Summary

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Gene symbol
TRMT6
Gene description
tRNA methyltransferase 6 non-catalytic subunit
See related
Ensembl:ENSOCUG00000014669
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 4 NC_067377.1 (20005956..20016808, complement)

Chromosome 4 - NC_067377.1Genomic Context describing neighboring genes Neighboring gene ER membrane protein complex subunit 2-like Neighboring gene shieldin complex subunit 1 Neighboring gene chromogranin B Neighboring gene minichromosome maintenance 8 homologous recombination repair factor Neighboring gene cardiolipin synthase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067377.1 Chromosome 4 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of tRNA (m1A) methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6
Names
tRNA methyltransferase 6 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067377.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    20005956..20016808 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002710842.4 → XP_002710888.1  tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X1

    UniProtKB/TrEMBL
    G1TMV6
    Related
    ENSOCUP00000018321.1
    Conserved Domains (2) summary
    pfam04189
    Location:20 → 287
    Gcd10p; Gcd10p family
    pfam06459
    Location:273 → 357
    RR_TM4-6; Ryanodine Receptor TM 4-6

  2. XM_017341765.2 → XP_017197254.1  tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X2

Nucleotide Protein
Heading Accession and Version

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