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SLC8A3 solute carrier family 8 member A3 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100339605, updated on 3-Apr-2024

Summary

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Gene symbol
SLC8A3
Gene description
solute carrier family 8 member A3
See related
Ensembl:ENSOCUG00000003984
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See SLC8A3 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 20 NC_067393.1 (1800820..1962637)

Chromosome 20 - NC_067393.1Genomic Context describing neighboring genes Neighboring gene synaptojanin 2 binding protein Neighboring gene cytochrome c oxidase assembly protein COX16 homolog, mitochondrial Neighboring gene uncharacterized LOC108175594 Neighboring gene SPARC related modular calcium binding 1 Neighboring gene guided entry of tail-anchored proteins factor CAMLG-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067393.1 Chromosome 20 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium:sodium antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/calcium exchanger 3
Names
solute carrier family 8 (sodium/calcium exchanger), member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067393.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    1800820..1962637
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008248556.3 → XP_008246778.1  sodium/calcium exchanger 3 isoform X1

    See identical proteins and their annotated locations for XP_008246778.1

    UniProtKB/TrEMBL
    A0A5F9DKG3, G1SKU5
    Related
    ENSOCUP00000045939.1
    Conserved Domains (4) summary
    TIGR00845
    Location:1 → 958
    caca; sodium/calcium exchanger 1
    pfam01699
    Location:784 → 949
    Na_Ca_ex; Sodium/calcium exchanger protein
    pfam03160
    Location:395 → 485
    Calx-beta; Calx-beta domain
    pfam16494
    Location:253 → 374
    Na_Ca_ex_C; C-terminal extension of sodium/calcium exchanger domain

  2. XM_051826304.1 → XP_051682264.1  sodium/calcium exchanger 3 isoform X4

  3. XM_017337694.2 → XP_017193183.1  sodium/calcium exchanger 3 isoform X2

    UniProtKB/TrEMBL
    G1SKU5
    Conserved Domains (4) summary
    TIGR00845
    Location:1 → 957
    caca; sodium/calcium exchanger 1
    pfam01699
    Location:783 → 948
    Na_Ca_ex; Sodium/calcium exchanger protein
    pfam03160
    Location:395 → 485
    Calx-beta; Calx-beta domain
    pfam16494
    Location:253 → 374
    Na_Ca_ex_C; C-terminal extension of sodium/calcium exchanger domain

  4. XM_017337697.2 → XP_017193186.1  sodium/calcium exchanger 3 isoform X6

    UniProtKB/TrEMBL
    G1SKU5
    Conserved Domains (4) summary
    TIGR00845
    Location:1 → 926
    caca; sodium/calcium exchanger 1
    pfam01699
    Location:752 → 917
    Na_Ca_ex; Sodium/calcium exchanger protein
    pfam03160
    Location:395 → 485
    Calx-beta; Calx-beta domain
    pfam16494
    Location:253 → 374
    Na_Ca_ex_C; C-terminal extension of sodium/calcium exchanger domain

  5. XM_008248555.3 → XP_008246777.1  sodium/calcium exchanger 3 isoform X1

    See identical proteins and their annotated locations for XP_008246777.1

    UniProtKB/TrEMBL
    A0A5F9DKG3, G1SKU5
    Conserved Domains (4) summary
    TIGR00845
    Location:1 → 958
    caca; sodium/calcium exchanger 1
    pfam01699
    Location:784 → 949
    Na_Ca_ex; Sodium/calcium exchanger protein
    pfam03160
    Location:395 → 485
    Calx-beta; Calx-beta domain
    pfam16494
    Location:253 → 374
    Na_Ca_ex_C; C-terminal extension of sodium/calcium exchanger domain

  6. XM_017337695.2 → XP_017193184.1  sodium/calcium exchanger 3 isoform X3

    UniProtKB/TrEMBL
    A0A5F9DGM1, G1SKU5
    Related
    ENSOCUP00000044766.1
    Conserved Domains (4) summary
    TIGR00845
    Location:1 → 952
    caca; sodium/calcium exchanger 1
    pfam01699
    Location:778 → 943
    Na_Ca_ex; Sodium/calcium exchanger protein
    pfam03160
    Location:395 → 485
    Calx-beta; Calx-beta domain
    pfam16494
    Location:253 → 374
    Na_Ca_ex_C; C-terminal extension of sodium/calcium exchanger domain

  7. XM_017337696.2 → XP_017193185.1  sodium/calcium exchanger 3 isoform X5

    UniProtKB/TrEMBL
    A0A5F9C3B2, G1SKU5
    Related
    ENSOCUP00000028275.1
    Conserved Domains (4) summary
    TIGR00845
    Location:1 → 927
    caca; sodium/calcium exchanger 1
    pfam01699
    Location:753 → 918
    Na_Ca_ex; Sodium/calcium exchanger protein
    pfam03160
    Location:395 → 485
    Calx-beta; Calx-beta domain
    pfam16494
    Location:253 → 374
    Na_Ca_ex_C; C-terminal extension of sodium/calcium exchanger domain
Nucleotide Protein
Heading Accession and Version

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