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Or80 odorant receptor 80 [ Nasonia vitripennis (jewel wasp) ]

Gene ID: 100328548, updated on 14-Dec-2023

Summary

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Gene symbol
Or80
Gene description
odorant receptor 80
Gene type
protein coding
RefSeq status
INFERRED
Organism
Nasonia vitripennis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
Also known as
NvOr80; NV17546
Summary
The insect gustatory and odorant receptors are chemoreceptors that interact with small molecules in sensory organs and trigger the perception of a taste or smell. The gustatory and odorant receptors are members of a large family of 7-transmembrane domain proteins that function as ligand-gated ion channels and may also signal via G-proteins and second messengers. The chemoreceptor gene family is the largest in the genome. The nomenclature assigned to the chemoreceptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jun 2010]
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
104 current Nvit_psr_1.1 (GCF_009193385.2) 3 Unlocalized Scaffold NC_045759.1 (10620315..10622063, complement)
103 previous assembly Nvit_psr_1 (GCF_009193385.1) 3 Unlocalized Scaffold NW_022279627.1 (2515219..2516967)

Chromosome 3 - NC_045759.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116738553 Neighboring gene odorant receptor 82 Neighboring gene odorant receptor 81 Neighboring gene 5S ribosomal RNA Neighboring gene exosome RNA helicase MTR4 Neighboring gene FAS-associated factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The insect chemoreceptor superfamily of the parasitoid jewel wasp Nasonia vitripennis. Robertson HM, et al. Insect Mol Biol, 2010 Feb. PMID 20167023
  2. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables odorant binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of chemical stimulus involved in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
odorant receptor 80

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001170925.1 → NP_001164396.1  odorant receptor 80

    Status: INFERRED

    Source sequence(s)
    WELF01000007
    UniProtKB/TrEMBL
    A0A7M6UDF1
    Conserved Domains (1) summary
    pfam02949
    Location:59 → 378
    7tm_6; 7tm Odorant receptor

RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nvit_psr_1.1

Genomic

  1. NC_045759.1 Reference Nvit_psr_1.1

    Range
    10620315..10622063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases