U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

EEF1A1 eukaryotic translation elongation factor 1 alpha 1 [ Saccoglossus kowalevskii ]

Gene ID: 100303511, updated on 19-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
EEF1A1
Gene description
eukaryotic translation elongation factor 1 alpha 1
See related
EnsemblRapid:GeneID_100303511
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Saccoglossus kowalevskii
Lineage
Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
Annotation information
Annotation category: partial on reference assembly
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003119430.1 (491879..497938, complement)

NW_003119430.1Genomic Context describing neighboring genes Neighboring gene adenosine deaminase-like Neighboring gene protein Mpv17-like Neighboring gene 28S ribosomal protein S14, mitochondrial-like Neighboring gene solute carrier family 2, facilitated glucose transporter member 8-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003119430 unplaced scaffold reference Skow_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Estimating metazoan divergence times with a molecular clock. Peterson KJ, et al. Proc Natl Acad Sci U S A, 2004 Apr 27. PMID 15084738, Free PMC Article
  2. cDNA sequences for transcription factors and signaling proteins of the hemichordate Saccoglossus kowalevskii: efficacy of the expressed sequence tag (EST) approach for evolutionary and developmental studies of a new organism. Freeman RM Jr, et al. Biol Bull, 2008 Jun. PMID 18574105

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
eukaryotic translation elongation factor 1 alpha 1
Names
elongation factor 1 alpha

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001184809.1 → NP_001171738.1  eukaryotic translation elongation factor 1 alpha 1

    Status: VALIDATED

    Source sequence(s)
    AY580280, FF436359, FF450411, FF473410
    UniProtKB/TrEMBL
    Q6PTG5
    Related
    NP_001171738.1, NM_001184809.1
    Conserved Domains (4) summary
    PTZ00141
    Location:1 → 460
    PTZ00141; elongation factor 1- alpha; Provisional
    cd01883
    Location:9 → 239
    EF1_alpha; Elongation Factor 1-alpha (EF1-alpha) protein family
    cd03693
    Location:242 → 332
    EF1_alpha_II; Domain II of elongation factor 1-alpha
    cd03705
    Location:335 → 438
    EF1_alpha_III; Domain III of Elongation Factor 1

RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Skow_1.1 Primary Assembly

Genomic

  1. NW_003119430.1 Reference Skow_1.1 Primary Assembly

    Range
    491879..497938 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.