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LOC100257173 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like [ Vitis vinifera (wine grape) ]

Gene ID: 100257173, updated on 17-Apr-2014
Gene symbol
LOC100257173
Gene description
dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like
Locus tag
VIT_00037680001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis
Location:
chromosome: 19
Exon count :
10
Annotation release Status Assembly Chr Location
Build 2.1 current 12X (GCF_000003745.2) 19 NC_012025.3 (6806690..6809957)

Chromosome 19 - NC_012025.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100248602 Neighboring gene uncharacterized LOC100258850 Neighboring gene probable F-box protein At4g22030-like Neighboring gene probable F-box protein At4g22030-like

Genomic Sequence:
NC_012025.3 chromosome 19 reference 12X Primary Assembly

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Carbon metabolism, organism-specific biosystem (from KEGG)
    Carbon metabolism, organism-specific biosystemCarbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excludi...
  • Carbon metabolism, conserved biosystem (from KEGG)
    Carbon metabolism, conserved biosystemCarbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excludi...
  • Citrate cycle (TCA cycle), organism-specific biosystem (from KEGG)
    Citrate cycle (TCA cycle), organism-specific biosystemThe citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form ...
  • Citrate cycle (TCA cycle), conserved biosystem (from KEGG)
    Citrate cycle (TCA cycle), conserved biosystemThe citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form ...
  • Lysine degradation, organism-specific biosystem (from KEGG)
    Lysine degradation, organism-specific biosystem
    Lysine degradation
  • Lysine degradation, conserved biosystem (from KEGG)
    Lysine degradation, conserved biosystem
    Lysine degradation
Names
dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like

RefSeqs of Annotated Genomes: Build 2.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 12X Primary Assembly

Genomic

  1. NC_012025.3 

    Range
    6806690..6809957
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002279233.2XP_002279269.2  

    See proteins identical to XP_002279269.2

    UniProtKB/TrEMBL
    D7T801
    Conserved Domains (3) summary
    cd06849
    Location:1989
    Blast Score: 203
    lipoyl_domain; Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid ...
    PTZ00144
    Location:2392
    Blast Score: 1200
    PTZ00144; dihydrolipoamide succinyltransferase; Provisional
    pfam00198
    Location:179390
    Blast Score: 656
    2-oxoacid_dh; 2-oxoacid dehydrogenases acyltransferase (catalytic domain)

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