Format

Send to:

Choose Destination

LOC100245165 alpha-amylase [ Vitis vinifera (wine grape) ]

Gene ID: 100245165, updated on 26-May-2016
Gene symbol
LOC100245165
Gene description
alpha-amylase
Locus tag
VIT_00031740001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis
See LOC100245165 in Genome Data Viewer Map Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
101 current 12X (GCF_000003745.3) 3 NC_012009.3 (3980863..3983679)

Chromosome 3 - NC_012009.3Genomic Context describing neighboring genes Neighboring gene abscisic acid 8'-hydroxylase 4 Neighboring gene LAG1 longevity assurance homolog 2 Neighboring gene alpha-amylase-like Neighboring gene alpha-amylase

Genomic Sequence:
NC_012009.3 Chromosome 3 Reference 12X Primary Assembly

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

RefSeqs of Annotated Genomes: Vitis vinifera Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 12X Primary Assembly

Genomic

  1. NC_012009.3 Reference 12X Primary Assembly

    Range
    3980863..3983679
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002285177.2XP_002285213.1  

    See identical proteins and their annotated locations for XP_002285213.1

    UniProtKB/TrEMBL
    D7TPI6
    Conserved Domains (3) summary
    smart00810
    Location:363423
    Alpha-amyl_C2; Alpha-amylase C-terminal beta-sheet domain
    PLN00196
    Location:6423
    PLN00196; alpha-amylase; Provisional
    cd11314
    Location:25373
    AmyAc_arch_bac_plant_AmyA; Alpha amylase catalytic domain found in archaeal, bacterial, and plant Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)