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TRIM24 tripartite motif containing 24 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100231658, updated on 8-Mar-2024

Summary

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Gene symbol
TRIM24
Gene description
tripartite motif containing 24
See related
Ensembl:ENSTGUG00000012279
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1A
Exon count:
19
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 1A NC_044212.2 (64980162..65036738, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 1A NC_044999.1 (64355848..64409769, complement)

Chromosome 1A - NC_044212.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121469145 Neighboring gene uncharacterized LOC121469146 Neighboring gene uncharacterized LOC115493471 Neighboring gene uncharacterized LOC115493470 Neighboring gene uncharacterized LOC115493472 Neighboring gene uncharacterized LOC121469147

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription intermediary factor 1-alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044212.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    64980162..65036738 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002191458.6 → XP_002191494.4  transcription intermediary factor 1-alpha

    UniProtKB/TrEMBL
    A0A674GBV0, H0ZPW5
    Conserved Domains (6) summary
    cd05502
    Location:897 → 1004
    Bromo_tif1_like; Bromodomain; tif1_like subfamily. Tif1 (transcription intermediary factor 1) is a member of the tripartite motif (TRIM) protein family, which is characterized by a particular domain architecture. It functions by recruiting coactivators and/or ...
    smart00502
    Location:275 → 401
    BBC; B-Box C-terminal domain
    cd15624
    Location:825 → 870
    PHD_TIF1gamma; PHD finger found in transcriptional intermediary factor 1 gamma (TIF1gamma)
    cd19828
    Location:227 → 283
    Bbox2_TIF1a_C-VI; B-box-type 2 zinc finger found in transcription intermediary factor 1-alpha (TIF1-alpha)
    cd19845
    Location:170 → 214
    Bbox1_TIF1a_C-VI; B-box-type 1 zinc finger found in transcription intermediary factor 1-alpha (TIF1-alpha)
    cl17238
    Location:56 → 143
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
Heading Accession and Version

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