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ZCCHC8 zinc finger CCHC-type containing 8 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100230422, updated on 8-Mar-2024

Summary

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Gene symbol
ZCCHC8
Gene description
zinc finger CCHC-type containing 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 15 NC_044227.2 (10650593..10662031)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 15 NC_045014.1 (10576777..10592473)

Chromosome 15 - NC_044227.2Genomic Context describing neighboring genes Neighboring gene kinetochore associated 1 Neighboring gene uncharacterized LOC121470754 Neighboring gene arginine and serine rich coiled-coil 2 Neighboring gene uncharacterized LOC121470753 Neighboring gene CAP-Gly domain containing linker protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ncRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCHC domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044227.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    10650593..10662031
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032751367.2 → XP_032607258.1  zinc finger CCHC domain-containing protein 8 isoform X1

    Conserved Domains (3) summary
    smart00343
    Location:218 → 233
    ZnF_C2HC; zinc finger
    cl02643
    Location:272 → 324
    PSP
    cl27170
    Location:29 → 116
    DUF460; Protein of unknown function (DUF460)

  2. XM_032751368.2 → XP_032607259.1  zinc finger CCHC domain-containing protein 8 isoform X2

    Conserved Domains (3) summary
    smart00343
    Location:217 → 232
    ZnF_C2HC; zinc finger
    cl02643
    Location:271 → 323
    PSP
    cl27170
    Location:29 → 116
    DUF460; Protein of unknown function (DUF460)

  3. XM_032751369.2 → XP_032607260.1  zinc finger CCHC domain-containing protein 8 isoform X3

    Conserved Domains (1) summary
    cl02643
    Location:45 → 97
    PSP
Nucleotide Protein
Heading Accession and Version

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