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C1QTNF3 C1q and TNF related 3 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100225260, updated on 8-Mar-2024

Summary

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Gene symbol
C1QTNF3
Gene description
C1q and TNF related 3
See related
Ensembl:ENSTGUG00000001951
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See C1QTNF3 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) Z NC_044241.2 (43679325..43693717, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) Z NC_045027.1 (46113749..46128125, complement)

Chromosome Z - NC_044241.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 45 member 2 Neighboring gene uncharacterized LOC121468113 Neighboring gene alpha-methylacyl-CoA racemase Neighboring gene retinoic acid induced 14 Neighboring gene RAD1 checkpoint DNA exonuclease

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
complement C1q tumor necrosis factor-related protein 3
Names
C1q and tumor necrosis factor related protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044241.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    43679325..43693717 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002194121.5 → XP_002194157.1  complement C1q tumor necrosis factor-related protein 3 isoform X1

    UniProtKB/TrEMBL
    H0YUP3
    Related
    ENSTGUP00000002012.1
    Conserved Domains (2) summary
    pfam01391
    Location:151 → 181
    Collagen; Collagen triple helix repeat (20 copies)
    pfam00386
    Location:187 → 310
    C1q; C1q domain

  2. XM_030257919.3 → XP_030113779.1  complement C1q tumor necrosis factor-related protein 3 isoform X2

    Conserved Domains (2) summary
    pfam00386
    Location:119 → 242
    C1q; C1q domain
    pfam01391
    Location:76 → 113
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

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