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NFYA nuclear transcription factor Y subunit alpha [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100220765, updated on 8-Mar-2024

Summary

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Gene symbol
NFYA
Gene description
nuclear transcription factor Y subunit alpha
See related
Ensembl:ENSTGUG00000001832
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 26
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 26 NC_044238.2 (2084814..2100080)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 26 NC_045024.1 (2004339..2019604)

Chromosome 26 - NC_044238.2Genomic Context describing neighboring genes Neighboring gene apolipoprotein B mRNA editing enzyme catalytic subunit 2 Neighboring gene O-acyl-ADP-ribose deacylase 1 Neighboring gene triggering receptor expressed on myeloid cells 2 Neighboring gene uncharacterized LOC105758892

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCAAT-binding factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear transcription factor Y subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044238.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    2084814..2100080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030291796.3 → XP_030147656.1  nuclear transcription factor Y subunit alpha isoform X2

    UniProtKB/TrEMBL
    A0A674GH18, H0YUC0
    Related
    ENSTGUP00000021665.1
    Conserved Domains (1) summary
    pfam02045
    Location:262 → 317
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  2. XM_030291805.2 → XP_030147665.1  nuclear transcription factor Y subunit alpha isoform X11

    UniProtKB/TrEMBL
    H0YUC0
    Conserved Domains (1) summary
    pfam02045
    Location:213 → 268
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  3. XM_030291794.3 → XP_030147654.1  nuclear transcription factor Y subunit alpha isoform X1

    UniProtKB/TrEMBL
    H0YUC0
    Conserved Domains (1) summary
    pfam02045
    Location:263 → 318
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  4. XM_030291799.2 → XP_030147659.1  nuclear transcription factor Y subunit alpha isoform X4

    UniProtKB/TrEMBL
    H0YUC0
    Conserved Domains (1) summary
    pfam02045
    Location:261 → 316
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  5. XM_030291803.2 → XP_030147663.1  nuclear transcription factor Y subunit alpha isoform X8

    UniProtKB/TrEMBL
    H0YUC0
    Conserved Domains (1) summary
    pfam02045
    Location:219 → 274
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  6. XM_041721213.1 → XP_041577147.1  nuclear transcription factor Y subunit alpha isoform X12

    UniProtKB/TrEMBL
    A0A674H0W5, H0YUC0
    Conserved Domains (1) summary
    pfam02045
    Location:190 → 245
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  7. XM_030291800.3 → XP_030147660.1  nuclear transcription factor Y subunit alpha isoform X5

    UniProtKB/TrEMBL
    H0YUC0
    Conserved Domains (1) summary
    pfam02045
    Location:257 → 312
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  8. XM_030291802.2 → XP_030147662.1  nuclear transcription factor Y subunit alpha isoform X7

    UniProtKB/TrEMBL
    H0YUC0
    Conserved Domains (1) summary
    pfam02045
    Location:228 → 283
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  9. XM_012571008.3 → XP_012426462.1  nuclear transcription factor Y subunit alpha isoform X3

    UniProtKB/TrEMBL
    H0YUC0
    Conserved Domains (1) summary
    pfam02045
    Location:262 → 317
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  10. XM_030291801.3 → XP_030147661.1  nuclear transcription factor Y subunit alpha isoform X6

    UniProtKB/TrEMBL
    A0A674HEE6, H0YUC0
    Related
    ENSTGUP00000033040.1
    Conserved Domains (1) summary
    pfam02045
    Location:234 → 289
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  11. XM_030291795.2 → XP_030147655.1  nuclear transcription factor Y subunit alpha isoform X1

    UniProtKB/TrEMBL
    H0YUC0
    Conserved Domains (1) summary
    pfam02045
    Location:263 → 318
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  12. XM_030291804.3 → XP_030147664.1  nuclear transcription factor Y subunit alpha isoform X10

    UniProtKB/TrEMBL
    H0YUC0
    Conserved Domains (1) summary
    pfam02045
    Location:217 → 272
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  13. XM_041721212.1 → XP_041577146.1  nuclear transcription factor Y subunit alpha isoform X9

    UniProtKB/TrEMBL
    H0YUC0
    Conserved Domains (1) summary
    pfam02045
    Location:218 → 273
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
Nucleotide Protein
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