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PELI1 pellino E3 ubiquitin protein ligase 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100218513, updated on 8-Mar-2024

Summary

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Gene symbol
PELI1
Gene description
pellino E3 ubiquitin protein ligase 1
See related
Ensembl:ENSTGUG00000002289
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 3 NC_044214.2 (111087780..111129459)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 3 NC_045001.1 (109958099..109999612)

Chromosome 3 - NC_044214.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121469812 Neighboring gene uncharacterized LOC115494557 Neighboring gene VPS54 subunit of GARP complex Neighboring gene UDP-glucose pyrophosphorylase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K48-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Toll signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase pellino homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044214.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    111087780..111129459
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041715463.1 → XP_041571397.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A674GQW8, A0A674HIR4
    Conserved Domains (1) summary
    pfam04710
    Location:52 → 460
    Pellino

  2. XM_030269279.3 → XP_030125139.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X2

    UniProtKB/TrEMBL
    A0A674GXB7
    Related
    ENSTGUP00000027699.1
    Conserved Domains (1) summary
    pfam04710
    Location:8 → 418
    Pellino

  3. XM_002199646.6 → XP_002199682.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X2

    See identical proteins and their annotated locations for XP_002199682.1

    UniProtKB/TrEMBL
    A0A674GXB7
    Related
    ENSTGUP00000025077.1
    Conserved Domains (1) summary
    pfam04710
    Location:8 → 418
    Pellino
Nucleotide Protein
Heading Accession and Version

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