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CCN5 cellular communication network factor 5 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100218100, updated on 8-Mar-2024

Summary

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Gene symbol
CCN5
Gene description
cellular communication network factor 5
See related
Ensembl:ENSTGUG00000005202
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Also known as
WISP2
Orthologs
human mouse all
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Genomic context

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See CCN5 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 20 NC_044232.2 (6027901..6034085, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 20 NC_045018.1 (6287009..6293187, complement)

Chromosome 20 - NC_044232.2Genomic Context describing neighboring genes Neighboring gene potassium two pore domain channel subfamily K member 15 Neighboring gene P2Y purinoceptor 1 Neighboring gene adenosine deaminase Neighboring gene cAMP-dependent protein kinase inhibitor gamma

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCN family member 5
Names
WNT1 inducible signaling pathway protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044232.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    6027901..6034085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030288726.3 → XP_030144586.3  CCN family member 5

    UniProtKB/TrEMBL
    A0A674HWG9, H0Z450
    Conserved Domains (2) summary
    smart00121
    Location:32 → 64
    IB; Insulin growth factor-binding protein homologues
    cl17735
    Location:100 → 160
    VWC; von Willebrand factor type C domain
Nucleotide Protein
Heading Accession and Version

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