syt4 synaptotagmin IV [Salmo salar (Atlantic salmon)] - Gene

Summary

Gene symbol: syt4
Gene description: synaptotagmin IV
See related: Ensembl:ENSSSAG00000071829
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Salmo salar
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

Location:: chromosome: ssa18

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
102	current	Ssal_v3.1 (GCF_905237065.1)	ssa18	NC_059459.1 (77386783..77395425, complement)
100	previous assembly	ICSASG_v2 (GCF_000233375.1)	ssa18	NC_027317.1 (65696019..65704002, complement)

Chromosome ssa18 - NC_059459.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables SNARE binding	IEA Inferred from Electronic Annotation more info	PubMed
enables calcium ion binding	IEA Inferred from Electronic Annotation more info	PubMed
enables calcium-dependent phospholipid binding	IEA Inferred from Electronic Annotation more info	PubMed
enables clathrin binding	IEA Inferred from Electronic Annotation more info	PubMed
enables phosphatidylserine binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in calcium-ion regulated exocytosis	IEA Inferred from Electronic Annotation more info	PubMed
involved_in cellular response to calcium ion	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of calcium ion-dependent exocytosis	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of dopamine secretion	IEA Inferred from Electronic Annotation more info	PubMed
involved_in vesicle fusion	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in axon	IEA Inferred from Electronic Annotation more info	PubMed
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in synapse	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: synaptotagmin-4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001140430.1 → NP_001133902.1 synaptotagmin-4

See identical proteins and their annotated locations for NP_001133902.1

Status: PROVISIONAL

Source sequence(s)

BT045850

UniProtKB/TrEMBL

B5X481

Related

ENSSSAP00000092866.1, ENSSSAT00000127123.2

Conserved Domains (2) summary

cd08388
Location:202 → 326

C2A_Synaptotagmin-4-11; C2A domain first repeat present in Synaptotagmins 4 and 11

cl14603
Location:337 → 482

C2; C2 domain