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SREK1IP1 SREK1 interacting protein 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100189985, updated on 8-Mar-2024

Summary

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Gene symbol
SREK1IP1
Gene description
SREK1 interacting protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Z
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) Z NC_044241.2 (53269111..53293759, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) Z NC_045027.1 (55752247..55763854, complement)

Chromosome Z - NC_044241.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115491126 Neighboring gene ring finger protein 180 Neighboring gene regulator of G protein signaling 7 binding protein Neighboring gene CWC27 spliceosome associated cyclophilin Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 6 Neighboring gene centromere protein K Neighboring gene peptidylprolyl isomerase domain and WD repeat containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A molecular neuroethological approach for identifying and characterizing a cascade of behaviorally regulated genes. Wada K, et al. Proc Natl Acad Sci U S A, 2006 Oct 10. PMID 17018643, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SREK1IP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044241.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    53269111..53293759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041711354.1 → XP_041567288.1  protein SREK1IP1 isoform X2

  2. XM_041711353.1 → XP_041567287.1  protein SREK1IP1 isoform X1

  3. XM_030258413.3 → XP_030114273.1  protein SREK1IP1 isoform X5

    Conserved Domains (1) summary
    pfam13917
    Location:9 → 30
    zf-CCHC_3; Zinc knuckle

  4. XM_030258412.3 → XP_030114272.1  protein SREK1IP1 isoform X3

    Conserved Domains (1) summary
    pfam13917
    Location:47 → 68
    zf-CCHC_3; Zinc knuckle

  5. XM_041711355.1 → XP_041567289.1  protein SREK1IP1 isoform X4

RNA

  1. XR_005978193.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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