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CCKBR cholecystokinin B receptor [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100189748, updated on 26-Mar-2024

Summary

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Gene symbol
CCKBR
Gene description
cholecystokinin B receptor
Locus tag
CR201_G0039854
See related
Ensembl:ENSPPYG00000003548
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Also known as
DKFZP459J059
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 9 NC_071994.2 (71112143..71124404, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 11 NC_071996.1 (67556713..67568974, complement)

Chromosome 9 - NC_071994.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129048706 Neighboring gene caveolae associated protein 3 Neighboring gene uncharacterized LOC129048708 Neighboring gene cyclic nucleotide gated channel subunit alpha 4 Neighboring gene FHF complex subunit HOOK interacting protein 1B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gastrin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neuropeptide receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuropeptide signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gastrin/cholecystokinin type B receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001135362.2 → NP_001128834.1  gastrin/cholecystokinin type B receptor

    See identical proteins and their annotated locations for NP_001128834.1

    Status: PROVISIONAL

    Source sequence(s)
    CR859644
    UniProtKB/TrEMBL
    Q5R8V5
    Conserved Domains (1) summary
    pfam00001
    Location:85 → 157
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071994.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    71112143..71124404 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024254698.2 → XP_024110466.1  gastrin/cholecystokinin type B receptor isoform X1

    UniProtKB/TrEMBL
    A0A2J8SVS6
    Conserved Domains (2) summary
    cd14964
    Location:57 → 81
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:55 → 468
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
Heading Accession and Version

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