NALF1 NALCN channel auxiliary factor 1 [Pongo abelii (Sumatran orangutan)] - Gene

Summary

Gene symbol: NALF1
Gene description: NALCN channel auxiliary factor 1
Locus tag: CR201_G0004205
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Pongo abelii
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Also known as: FAM155A
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 14

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2)	14	NC_071999.2 (113395454..114092464, complement)
RS_2023_04	previous assembly	NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1)	13	NC_071998.1 (96204263..96902116, complement)

Chromosome 14 - NC_071999.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH11314 (e-PCR)
- UniSTS:84237

D13S1487 (e-PCR)
- UniSTS:59715

D13S778 (e-PCR), detects polymorphism
- UniSTS:5198

SHGC-143349 (e-PCR)
- UniSTS:171875

D13S669E (e-PCR)
- UniSTS:153201

D13S619 (e-PCR)
- UniSTS:148885

RH92787 (e-PCR)
- UniSTS:93087

SHGC-106087 (e-PCR)
- UniSTS:169660

SHGC-144964 (e-PCR)
- UniSTS:172488

RH102388 (e-PCR)
- UniSTS:96722

SHGC-81770 (e-PCR)
- UniSTS:103928

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables stretch-activated, monoatomic cation-selective, calcium channel activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in calcium ion import across plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: NALCN channel auxiliary factor 1

Names: family with sequence similarity 155 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001133986.1 → NP_001127458.1 NALCN channel auxiliary factor 1

See identical proteins and their annotated locations for NP_001127458.1

Status: PROVISIONAL

Source sequence(s)

CR859589

UniProtKB/TrEMBL

Q5R908

Conserved Domains (1) summary

pfam12929
Location:12 → 57

Mid1; Stretch-activated Ca2+-permeable channel component

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

NC_071999.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Range

113395454..114092464 complement

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GenBank, FASTA, Sequence Viewer (Graphics)