Display Settings:

Format

Send to:

Choose Destination
We are sorry, but NCBI web applications do not support your browser and may not function properly. More information

    HBP1 HMG-box transcription factor 1 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100173312, updated on 20-Feb-2013
    Gene symbol
    HBP1
    Gene description
    HMG-box transcription factor 1
    See related
    Ensembl:ENSPPYG00000017898
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Location :
    chromosome: 7
    Sequence :
    Chromosome: 7; NC_012598.1 (103314149..103349819)
    See HBP1 in MapViewer

    Chromosome 7 - NC_012598.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma Neighboring gene protein kinase, cAMP-dependent, regulatory, type II, beta Neighboring gene uncharacterized LOC100937279 Neighboring gene component of oligomeric golgi complex 5 Neighboring gene ribosomal protein L21 pseudogene Neighboring gene G protein-coupled receptor 22

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Markers

    Clone Names

    • DKFZp469C1019
    Preferred Names
    HMG box-containing protein 1
    Names
    HMG box-containing protein 1
    HMG box transcription factor 1
    high mobility group box transcription factor 1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001132859.1NP_001126331.1  HMG box-containing protein 1

      Status: PROVISIONAL

      Source sequence(s)
      CR860133
      UniProtKB/Swiss-Prot
      Q5R7I3
      Related
      ENSPPYP00000020062, ENSPPYT00000020854
      Conserved Domains (2) summary
      cd01388
      Location:443514
      Blast Score: 265
      SOX-TCF_HMG-box; SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and ...
      smart00536
      Location:224349
      Blast Score: 456
      AXH; domain in Ataxins and HMG containing proteins

    RefSeqs of Annotated Genomes: Build 1.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P_pygmaeus_2.0.2 Primary Assembly

    Genomic

    1. NC_012598.1 Reference P_pygmaeus_2.0.2 Primary Assembly

      Range
      103314149..103349819
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

      Supplemental Content

      Recent activity

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...