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    SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100172867, updated on 11-May-2013
    Gene symbol
    SLC8A1
    Gene description
    solute carrier family 8 (sodium/calcium exchanger), member 1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Location :
    chromosome: 2A
    Sequence :
    Chromosome: 2A; NC_012592.1 (71142273..71477688)
    See SLC8A1 in MapViewer

    Chromosome 2A - NC_012592.1Genomic Context describing neighboring genes Neighboring gene L-lactate dehydrogenase A chain-like Neighboring gene putative heterogeneous nuclear ribonucleoprotein A1-like 3-like Neighboring gene uncharacterized LOC100939515 Neighboring gene uncharacterized LOC100939347

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    • Calcium signaling pathway, organism-specific biosystem (from KEGG)
      Calcium signaling pathway, organism-specific biosystemCa2+ that enters the cell from the outside is a principal source of signal Ca2+. Entry of Ca2+ is driven by the presence of a large electrochemical gradient across the plasma membrane. Cells use this...
    • Calcium signaling pathway, conserved biosystem (from KEGG)
      Calcium signaling pathway, conserved biosystemCa2+ that enters the cell from the outside is a principal source of signal Ca2+. Entry of Ca2+ is driven by the presence of a large electrochemical gradient across the plasma membrane. Cells use this...
    • Protein digestion and absorption, organism-specific biosystem (from KEGG)
      Protein digestion and absorption, organism-specific biosystemProtein is a dietary component essential for nutritional homeostasis in humans. Normally, ingested protein undergoes a complex series of degradative processes following the action of gastric, pancrea...
    • Protein digestion and absorption, conserved biosystem (from KEGG)
      Protein digestion and absorption, conserved biosystemProtein is a dietary component essential for nutritional homeostasis in humans. Normally, ingested protein undergoes a complex series of degradative processes following the action of gastric, pancrea...

    Markers

    Clone Names

    • DKFZp469I106
    Preferred Names
    sodium/calcium exchanger 1
    Names
    sodium/calcium exchanger 1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001132461.1NP_001125933.1  sodium/calcium exchanger 1 precursor

      Status: PROVISIONAL

      Source sequence(s)
      CR859413
      UniProtKB/TrEMBL
      Q5R9H5
      Conserved Domains (4) summary
      pfam01699
      Location:773926
      Blast Score: 253
      Na_Ca_ex; Sodium/calcium exchanger protein
      smart00237
      Location:537627
      Blast Score: 254
      Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
      pfam03160
      Location:406496
      Blast Score: 304
      Calx-beta; Calx-beta domain
      TIGR00845
      Location:4937
      Blast Score: 4349
      caca; sodium/calcium exchanger 1

    RefSeqs of Annotated Genomes: Build 1.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P_pygmaeus_2.0.2 Primary Assembly

    Genomic

    1. NC_012592.1 Reference P_pygmaeus_2.0.2 Primary Assembly

      Range
      71142273..71477688
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

      Supplemental Content

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