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ATP2B1 ATPase plasma membrane Ca2+ transporting 1 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100172812, updated on 26-Mar-2024

Summary

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Gene symbol
ATP2B1
Gene description
ATPase plasma membrane Ca2+ transporting 1
Locus tag
CR201_G0001516
See related
Ensembl:ENSPPYG00000004820
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 10 NC_071995.2 (88012051..88131651, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 12 NC_071997.1 (87987003..88106616, complement)

Chromosome 10 - NC_071995.2Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase 6 Neighboring gene POC1 centriolar protein B Neighboring gene centromere protein C-like Neighboring gene uncharacterized LOC103892101 Neighboring gene large ribosomal subunit protein uL2m-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • DKFZp459A1127

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type calcium transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables PDZ domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasma membrane calcium-transporting ATPase 1
Names
ATPase, Ca++ transporting, plasma membrane 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071995.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    88012051..88131651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024256622.3 → XP_024112390.1  plasma membrane calcium-transporting ATPase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8XNC4, H2NI81
    Conserved Domains (2) summary
    TIGR01517
    Location:15 → 1064
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam12424
    Location:1103 → 1149
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal

  2. XM_054527486.2 → XP_054383461.1  plasma membrane calcium-transporting ATPase 1 isoform X3

  3. XM_063712218.1 → XP_063568288.1  plasma membrane calcium-transporting ATPase 1 isoform X2

  4. XM_054527483.2 → XP_054383458.1  plasma membrane calcium-transporting ATPase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8XNC4, H2NI81

  5. XM_054527484.2 → XP_054383459.1  plasma membrane calcium-transporting ATPase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8XNC4, H2NI81
Nucleotide Protein
Heading Accession and Version

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