U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

APPBP2 amyloid beta precursor protein binding protein 2 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100171757, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
APPBP2
Gene description
amyloid beta precursor protein binding protein 2
Locus tag
CR201_G0012011
See related
Ensembl:ENSPPYG00000008516
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 19
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 19 NC_072004.2 (54073374..54154018, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 17 NC_072002.1 (56373030..56453697, complement)

Chromosome 19 - NC_072004.2Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein uL11-like Neighboring gene non-histone chromosomal protein HMG-17-like Neighboring gene splicing factor 3B subunit 6-like Neighboring gene U6 spliceosomal RNA Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1D Neighboring gene large ribosomal subunit protein eL42-like Neighboring gene BCAS3 microtubule associated cell migration factor

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Clone Names

  • DKFZp459F0530

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-like ligase-substrate adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul2-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
amyloid protein-binding protein 2
Names
amyloid beta precursor protein (cytoplasmic tail) binding protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001131419.1 → NP_001124891.1  amyloid protein-binding protein 2

    See identical proteins and their annotated locations for NP_001124891.1

    Status: PROVISIONAL

    Source sequence(s)
    CR857629
    UniProtKB/TrEMBL
    Q5REA4
    Related
    ENSPPYP00000009567.2, ENSPPYT00000009949.3
    Conserved Domains (2) summary
    pfam13374
    Location:428 → 466
    TPR_10; Tetratricopeptide repeat
    pfam13424
    Location:427 → 501
    TPR_12; Tetratricopeptide repeat

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072004.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    54073374..54154018 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Miscellaneous