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lrrc49 leucine rich repeat containing 49 [ Xenopus (Silurana) tropicalis (western clawed frog) ]

Gene ID: 100170553, updated on 22-Nov-2014
Official Symbol
lrrc49provided by Xenbase
Official Full Name
leucine rich repeat containing 49provided by Xenbase
Primary source
Xenbase:XB-GENE-1011788
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus (Silurana) tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
See lrrc49 in MapViewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668244.1 (56860624..56913675)

NW_004668244.1Genomic Context describing neighboring genes Neighboring gene La ribonucleoprotein domain family, member 6 Neighboring gene zinc finger, DHHC-type containing 12 Neighboring gene thrombospondin, type I, domain containing 4 Neighboring gene bone morphogenetic protein 7, gene 2

Genomic Sequence:
NW_004668244 unplaced scaffold reference Xtropicalis_v7 Primary Assembly

Homology

Preferred Names
leucine rich repeat containing 49
Names
leucine rich repeat containing 49

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001130330.1NP_001123802.1  leucine rich repeat containing 49

    See proteins identical to NP_001123802.1

    Status: PROVISIONAL

    Source sequence(s)
    BC167597
    UniProtKB/TrEMBL
    B3DLV6
    Conserved Domains (2) summary
    pfam12799
    Location:233274
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:232288
    LRR_8; Leucine rich repeat

RefSeqs of Annotated Genomes: Xenopus (Silurana) tropicalis Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xtropicalis_v7 Primary Assembly

Genomic

  1. NW_004668244.1 

    Range
    56860624..56913675
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)