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SETDB2 SET domain, bifurcated 2 [ Sus scrofa (pig) ]

Gene ID: 100157885, updated on 3-Jun-2014
Gene symbol
SETDB2
Gene description
SET domain, bifurcated 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
Also known as
CAB39L
See SETDB2 in MapViewer
Location:
11; 11
Exon count :
14
Annotation release Status Assembly Chr Location
104 current Sscrofa10.2 (GCF_000003025.5) 11 NC_010453.4 (18568628..18612781, complement)

Chromosome 11 - NC_010453.4Genomic Context describing neighboring genes Neighboring gene regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 Neighboring gene PHD finger protein 11 Neighboring gene calcium binding protein 39-like Neighboring gene cytidine and dCMP deaminase domain containing 1

Genomic Sequence:
NC_010453.4 chromosome 11 reference Sscrofa10.2 Primary Assembly

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa10.2 Primary Assembly

Genomic

  1. NC_010453.4 

    Range
    18568628..18612781
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003130966.2XP_003131014.1  

    Conserved Domains (3) summary
    smart00317
    Location:591677
    Blast Score: 179
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    cd01395
    Location:152212
    Blast Score: 251
    HMT_MBD; Methyl-CpG binding domains (MBD) present in putative histone methyltransferases (HMT) such as CLLD8 and SETDB1 proteins; CLLD8 contains a MBD, a PreSET and a bifurcated SET domain, suggesting that CLLD8 might be associated with methylation-mediated ...
    pfam05033
    Location:233347
    Blast Score: 258
    Pre-SET; Pre-SET motif

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