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CSPP1 centrosome and spindle pole associated protein 1 [ Sus scrofa (pig) ]

Gene ID: 100152780, updated on 8-Mar-2024

Summary

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Official Symbol
CSPP1provided by VGNC
Official Full Name
centrosome and spindle pole associated protein 1provided by VGNC
Primary source
VGNC:VGNC:87045
See related
Ensembl:ENSSSCG00000006202
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in kidney (RPKM 8.0), ovary (RPKM 7.2) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See CSPP1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
38
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 4 NC_010446.5 (67614067..67844337, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 4 NC_010446.4 (73674923..73799625, complement)

Chromosome 4 - NC_010446.5Genomic Context describing neighboring genes Neighboring gene carboxypeptidase A6 Neighboring gene uncharacterized LOC110260281 Neighboring gene tigger transposable element-derived protein 1-like Neighboring gene ADP ribosylation factor guanine nucleotide exchange factor 1 Neighboring gene COP9 signalosome subunit 5 Neighboring gene protein phosphatase 1 regulatory subunit 42 Neighboring gene serine/threonine-protein kinase Sgk3 Neighboring gene transcription factor 24 Neighboring gene minichromosome maintenance domain containing 2 Neighboring gene uncharacterized LOC106510061

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle pole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosome and spindle pole-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010446.5 Reference Sscrofa11.1 Primary Assembly

    Range
    67614067..67844337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021089277.1 → XP_020944936.1  centrosome and spindle pole-associated protein 1 isoform X12

    UniProtKB/TrEMBL
    A0A5G2QH15, A0A8D0R4L7

  2. XM_021089276.1 → XP_020944935.1  centrosome and spindle pole-associated protein 1 isoform X12

    UniProtKB/TrEMBL
    A0A5G2QH15, A0A8D0R4L7
    Related
    ENSSSCP00000064073.2, ENSSSCT00000086373.2

  3. XM_013996695.2 → XP_013852149.1  centrosome and spindle pole-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A287ABU9, A0A4X1UXR1, A0A8D0WKG6, A0A8D1H5V8
    Related
    ENSSSCP00000041494.1, ENSSSCT00000063543.2

  4. XM_005663039.3 → XP_005663096.1  centrosome and spindle pole-associated protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A4X1UYT3, A0A8D0WKQ1, A0A8D1BM66

  5. XM_021089274.1 → XP_020944933.1  centrosome and spindle pole-associated protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8D0R5Q5, A0A8D0U5B7

  6. XM_013996702.2 → XP_013852156.1  centrosome and spindle pole-associated protein 1 isoform X11

    UniProtKB/TrEMBL
    A0A480S882, A0A8D0R4L7

  7. XM_013996701.2 → XP_013852155.1  centrosome and spindle pole-associated protein 1 isoform X10

    UniProtKB/TrEMBL
    A0A8D0P4E9, A0A8D0R662

  8. XM_013996699.2 → XP_013852153.1  centrosome and spindle pole-associated protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8D0R5Q5, A0A8D0U5B7
    Related
    ENSSSCP00000058544.2, ENSSSCT00000046810.3

  9. XM_005663040.3 → XP_005663097.1  centrosome and spindle pole-associated protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8D0NXY0, A0A8D0R4L7

  10. XM_005663038.3 → XP_005663095.1  centrosome and spindle pole-associated protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A4X1UXR1

  11. XM_021089273.1 → XP_020944932.1  centrosome and spindle pole-associated protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A4X1UYT3, A0A8D0WKQ1, A0A8D1BM66

  12. XM_021089272.1 → XP_020944931.1  centrosome and spindle pole-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A287ABU9, A0A4X1UXR1, A0A8D0WKG6, A0A8D1H5V8

  13. XM_013996700.2 → XP_013852154.1  centrosome and spindle pole-associated protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A4X1UXR1, A0A8D0WKG6

  14. XM_005663041.3 → XP_005663098.1  centrosome and spindle pole-associated protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A286ZT63, A0A4X1UU11, A0A8D0P5U7
    Related
    ENSSSCP00000034833.3, ENSSSCT00000045141.3

  15. XM_005663042.3 → XP_005663099.1  centrosome and spindle pole-associated protein 1 isoform X9

    UniProtKB/TrEMBL
    A0A4X1UU20

  16. XM_021089275.1 → XP_020944934.1  centrosome and spindle pole-associated protein 1 isoform X8

    UniProtKB/TrEMBL
    A0A4X1UU20
Nucleotide Protein
Heading Accession and Version

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