U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cisha cytokine inducible SH2-containing protein a [ Takifugu rubripes (torafugu) ]

Gene ID: 100144307, updated on 24-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
cisha
Gene description
cytokine inducible SH2-containing protein a
See related
Ensembl:ENSTRUG00000027770
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
cish
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See cisha in Genome Data Viewer
Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 19 NC_042303.1 (10236429..10238884, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 19 NC_018908.1 (6783857..6786295, complement)

Chromosome 19 - NC_042303.1Genomic Context describing neighboring genes Neighboring gene NPR2 like, GATOR1 complex subunit Neighboring gene HemK methyltransferase family member 1 Neighboring gene twinfilin actin binding protein 2 Neighboring gene WD repeat domain 82 Neighboring gene microRNA let-7j

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Global identification and comparative analysis of SOCS genes in fish: insights into the molecular evolution of SOCS family. Jin HJ, et al. Mol Immunol, 2008 Mar. PMID 18029016

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cytokine-inducible SH2-containing protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001122859.2 → NP_001116331.1  cytokine-inducible SH2-containing protein

    See identical proteins and their annotated locations for NP_001116331.1

    Status: PROVISIONAL

    Source sequence(s)
    EF195746
    UniProtKB/TrEMBL
    B0EVN0
    Related
    ENSTRUP00000079144.1, ENSTRUT00000075571.1
    Conserved Domains (2) summary
    smart00969
    Location:188 → 221
    SOCS_box; The SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases
    cd10718
    Location:57 → 144
    SH2_CIS; Src homology 2 (SH2) domain found in cytokine-inducible SH2-containing protein (CIS)

RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042303.1 Reference fTakRub1.2 Primary Assembly

    Range
    10236429..10238884 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011613920.2 → XP_011612222.1  cytokine-inducible SH2-containing protein isoform X1

    See identical proteins and their annotated locations for XP_011612222.1

    UniProtKB/TrEMBL
    B0EVN0
    Conserved Domains (2) summary
    smart00969
    Location:188 → 221
    SOCS_box; The SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases
    cd10718
    Location:57 → 144
    SH2_CIS; Src homology 2 (SH2) domain found in cytokine-inducible SH2-containing protein (CIS)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.