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RB1CC1 RB1 inducible coiled-coil 1 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100079581, updated on 8-Mar-2024

Summary

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Gene symbol
RB1CC1
Gene description
RB1 inducible coiled-coil 1
See related
Ensembl:ENSOANG00000007278
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
24
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 7 NC_041734.1 (10860140..10937895)

Chromosome 7 - NC_041734.1Genomic Context describing neighboring genes Neighboring gene opioid receptor kappa 1 Neighboring gene uncharacterized LOC120638506 Neighboring gene uncharacterized LOC114813308 Neighboring gene uncharacterized LOC114813290 Neighboring gene small nucleolar RNA SNORA7 Neighboring gene small nucleolar RNA SNORA7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041734.1 Chromosome 7 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piecemeal microautophagy of the nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reticulophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Atg1/ULK1 kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RB1-inducible coiled-coil protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041734.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    10860140..10937895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029069590.2 → XP_028925423.1  RB1-inducible coiled-coil protein 1 isoform X2

    Conserved Domains (4) summary
    COG0419
    Location:859 → 1398
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam10377
    Location:1466 → 1590
    ATG11; Autophagy-related protein 11
    pfam17638
    Location:655 → 711
    UL42; HCMV UL42
    cd17060
    Location:2 → 76
    Ubl_RB1CC1; ubiquitin-like (Ubl) domain found in retinoblastoma 1-inducible coiled-coil protein 1 (RB1CC1) and similar proteins

  2. XM_029069589.2 → XP_028925422.1  RB1-inducible coiled-coil protein 1 isoform X1

    UniProtKB/TrEMBL
    F7CJW6
    Related
    ENSOANP00000011587.2
    Conserved Domains (4) summary
    COG0419
    Location:859 → 1398
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam10377
    Location:1466 → 1593
    ATG11; Autophagy-related protein 11
    pfam17638
    Location:655 → 711
    UL42; HCMV UL42
    cd17060
    Location:2 → 76
    Ubl_RB1CC1; ubiquitin-like (Ubl) domain found in retinoblastoma 1-inducible coiled-coil protein 1 (RB1CC1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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