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FAT2 FAT atypical cadherin 2 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100077822, updated on 8-Mar-2024

Summary

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Gene symbol
FAT2
Gene description
FAT atypical cadherin 2
See related
Ensembl:ENSOANG00000005115
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X1
Exon count:
24
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) X1 NC_041749.1 (32967235..33065527)

Chromosome X1 - NC_041749.1Genomic Context describing neighboring genes Neighboring gene antioxidant 1 copper chaperone Neighboring gene secreted protein acidic and cysteine rich Neighboring gene proton-coupled amino acid transporter 1-like Neighboring gene GM2 ganglioside activator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041749.1 Chromosome X1 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protocadherin Fat 2
Names
FAT tumor suppressor homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041749.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    32967235..33065527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029051017.2 → XP_028906850.1  protocadherin Fat 2

    UniProtKB/TrEMBL
    F6Y9Z1
    Related
    ENSOANP00000008120.4
    Conserved Domains (4) summary
    cd11304
    Location:3321 → 3417
    Cadherin_repeat; Cadherin tandem repeat domain
    pfam02210
    Location:3795 → 3916
    Laminin_G_2; Laminin G domain
    pfam00008
    Location:3985 → 4015
    EGF; EGF-like domain
    cl29226
    Location:1880 → 1954
    Cadherin; Cadherin domain
Nucleotide Protein
Heading Accession and Version

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