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TOX2 TOX high mobility group box family member 2 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100077680, updated on 8-Mar-2024

Summary

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Gene symbol
TOX2
Gene description
TOX high mobility group box family member 2
See related
Ensembl:ENSOANG00000014345
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 8 NC_041735.1 (21779144..22051884, complement)

Chromosome 8 - NC_041735.1Genomic Context describing neighboring genes Neighboring gene L3MBTL histone methyl-lysine binding protein 1 Neighboring gene uncharacterized LOC114813819 Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene small nucleolar RNA SNORA7 Neighboring gene uncharacterized LOC114813817 Neighboring gene uncharacterized LOC114813818

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041735.1 Chromosome 8 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TOX high mobility group box family member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041735.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    21779144..22051884 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029070764.2 → XP_028926597.1  TOX high mobility group box family member 2 isoform X4

    UniProtKB/TrEMBL
    A0A6I8NNJ5
    Conserved Domains (2) summary
    cd00084
    Location:165 → 230
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam09770
    Location:230 → 399
    PAT1; Topoisomerase II-associated protein PAT1

  2. XM_029070759.2 → XP_028926592.1  TOX high mobility group box family member 2 isoform X1

    UniProtKB/TrEMBL
    A0A6I8NA35, A0A6I8PT86
    Related
    ENSOANP00000037635.1
    Conserved Domains (2) summary
    cd00084
    Location:247 → 312
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam09770
    Location:312 → 481
    PAT1; Topoisomerase II-associated protein PAT1

  3. XM_029070761.2 → XP_028926594.1  TOX high mobility group box family member 2 isoform X2

    UniProtKB/TrEMBL
    A0A6I8PT86
    Conserved Domains (2) summary
    cd00084
    Location:223 → 288
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam09770
    Location:288 → 457
    PAT1; Topoisomerase II-associated protein PAT1

  4. XM_029070762.2 → XP_028926595.1  TOX high mobility group box family member 2 isoform X3

    UniProtKB/TrEMBL
    A0A6I8N2J0, A0A6I8PT86
    Related
    ENSOANP00000054752.1
    Conserved Domains (2) summary
    cd00084
    Location:208 → 273
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam09770
    Location:277 → 442
    PAT1; Topoisomerase II-associated protein PAT1
Nucleotide Protein
Heading Accession and Version

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