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CHSY3 chondroitin sulfate synthase 3 [ Equus caballus (horse) ]

Gene ID: 100072984, updated on 8-Mar-2024

Summary

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Gene symbol
CHSY3
Gene description
chondroitin sulfate synthase 3
See related
Ensembl:ENSECAG00000001407
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
3
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 14 NC_009157.3 (44219539..44459081, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 14 NC_009157.2 (44917268..45156628, complement)

Chromosome 14 - NC_009157.3Genomic Context describing neighboring genes Neighboring gene LYR motif containing 7 Neighboring gene histidine triad nucleotide binding protein 1 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 19 Neighboring gene membrane integral NOTCH2 associated receptor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009157.3 Reference EquCab3.0 Primary Assembly

    Range
    44219539..44459081 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014730389.2 → XP_014585875.2  chondroitin sulfate synthase 3

    UniProtKB/TrEMBL
    A0A9L0T428
    Related
    ENSECAP00000081275.1, ENSECAT00000142885.1
    Conserved Domains (2) summary
    pfam05679
    Location:326 → 862
    CHGN; Chondroitin N-acetylgalactosaminyltransferase
    cl21608
    Location:169 → 396
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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